Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910578.1_cds_XP_016460628.1_54032
CDS Infomation

[gene=LOC107784075] [db_xref=GeneID:107784075] [protein=scarecrow-like protein 14] [partial=3'] [protein_id=XP_016460628.1] [location=complement(join(<7..213,370..1716))] [gbkey=CDS]
Sequence

ATGGATCCTCGGTTCAATCCGTTGCCTCATCCTGTAAACACTTTCGAGTTCGAAGATCAG
ATCAATTTGTCTAGCTTTGAGGAATCACTGAATCATCCTCTCAGTTATACGGATAACTAT
GTAGCTTTTGGTGCCCCATACAATACATCAAGTCCAGACGTTGGTAACTTTGCTCCATCC
TCAAATGTGAGCTCGGAAGTGGACTCTCCAGATGATCACGACTCTGATTCGCTGTTCAAG
TACCTTAACCAGATACTAATGGAGGAGAATATTGAAGATAAGCCCAGCATGTTCCATGAT
CCGCTTGCTCTAAAAGCTGCTGAGAAGTCCTTCTATGAAGCCCTTGGCAAGTCGTACCCT
CCTTCACCCTATCGTACCTCTGATTATGTTTACCATCAGTTAAAAAGCCCAGACAGCATT
TTCTGGAATTCCAGCGAGCATAGTACAAGTAGTAGCAATACTGGTACTAATTCCACCGAT
CCTCAATGGGTTGTTGATCCTGGAGAATTTAGGTTGCCCGTAGAGGGTCATCCATCGGAA
TACAACGTCCAACCTTTGGTGCAGAGTAACTCAGAGAGGTCCCGTGGTTCTTTAAACAAC
TTCAATAATTCAAATGCCCATGTGGACACTTTAGTAAATCCTAATGTATTTACTGATAGT
GAGTCCATCTTACAGTTCAGGAGAGGGATGGAGGAAGCTAGTAAATTCCTTCCAAACCTT
AGTCAATTTGTCATCGATTTGGATAAATATACATTGCCTCCAAAGATGGAGGAAGTATCC
AAAGAGGCTGTCGTCAAGGTAGAGAAGGATGAGAAGAATCACTCACCTAATGGCACGAAA
GGAAGAAAGCATCAGTATCCCGAGGACAGTGATCACGAGGACGAAAGGAGCAACAAACAA
TCAGCAATATATGTGGAGGAGGAGGTTGAGTTATCAGAGATGTTTGATAGGGTTCTGCTT
TGTACAGATAAGGGGACAGGATGTGGTGATGTCAAGCGTGAGATGCCATCTGAAGTAAAC
ATGAGTTCAGATCAGAATGGACAAGCACATGGATCAAATGGTGGAAAAACTCGTGCTAAA
AAACAAGCGACTAAAAATGAAGCTGTGGATATAAGGACTCTCTTAATTAGCTGTGCACAA
TCTGTTGCTGCTGACGATCGCAGGACGGCAAATGAACAGCTAAAGCATATCAGGCAGCAT
TCTTCACCCACAGGTGATGCATACCAGAGGCTGGCCAGTGTATTTGCAGATGGCCTTGAA
GCTCGGCTGGCTGGCACTGGCACTCAACAATATGCTGCCCTTGCCCCGAAAAGGATCACA
GCTGCTGAGAAATTGAAAGCATACCAGATACCTGGTGGGCCTCCAAAGCTTCGCATTACT
GGAATAGACCTTCCCCAACCTGGCTTCAGGCCAGCAGAAAGCTTAGAACAGACGGGGAGC
CGCTTGGCAAAATATTGTGAGCGCTTTCATGTTCCATTTGAGTATAATGCGATAGCAACA
CAGAATTGGGAGAATATTAAAATTGAAGACTTGAAACTTGCAAGTGGCGAGACT

Peptide Sequence

PEP ID

XP_016460628.1
PEP Infomation

PREDICTED: scarecrow-like protein 14, partial [Nicotiana tabacum]
Sequence

MDPRFNPLPHPVNTFEFEDQINLSSFEESLNHPLSYTDNYVAFGAPYNTSSPDVGNFAPS
SNVSSEVDSPDDHDSDSLFKYLNQILMEENIEDKPSMFHDPLALKAAEKSFYEALGKSYP
PSPYRTSDYVYHQLKSPDSIFWNSSEHSTSSSNTGTNSTDPQWVVDPGEFRLPVEGHPSE
YNVQPLVQSNSERSRGSLNNFNNSNAHVDTLVNPNVFTDSESILQFRRGMEEASKFLPNL
SQFVIDLDKYTLPPKMEEVSKEAVVKVEKDEKNHSPNGTKGRKHQYPEDSDHEDERSNKQ
SAIYVEEEVELSEMFDRVLLCTDKGTGCGDVKREMPSEVNMSSDQNGQAHGSNGGKTRAK
KQATKNEAVDIRTLLISCAQSVAADDRRTANEQLKHIRQHSSPTGDAYQRLASVFADGLE
ARLAGTGTQQYAALAPKRITAAEKLKAYQIPGGPPKLRITGIDLPQPGFRPAESLEQTGS
RLAKYCERFHVPFEYNAIATQNWENIKIEDLKLASGET

Transcript Sequence

Gene sequence data has not been registered.